600 lines
12 KiB
C
600 lines
12 KiB
C
/*
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* Small tool to check for dedupable blocks in a file or device. Basically
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* just scans the filename for extents of the given size, checksums them,
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* and orders them up.
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*/
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#include <stdio.h>
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#include <stdio.h>
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#include <unistd.h>
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#include <inttypes.h>
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#include <assert.h>
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#include <sys/types.h>
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#include <sys/stat.h>
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#include <sys/ioctl.h>
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#include <fcntl.h>
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#include <string.h>
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#include "../flist.h"
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#include "../log.h"
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#include "../mutex.h"
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#include "../smalloc.h"
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#include "../minmax.h"
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#include "../crc/md5.h"
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#include "../lib/memalign.h"
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#include "../os/os.h"
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#include "../gettime.h"
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#include "../fio_time.h"
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#include "../lib/rbtree.h"
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#include "../lib/bloom.h"
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#include "debug.h"
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struct worker_thread {
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pthread_t thread;
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volatile int done;
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int fd;
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uint64_t cur_offset;
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uint64_t size;
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unsigned long items;
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unsigned long dupes;
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int err;
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};
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struct extent {
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struct flist_head list;
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uint64_t offset;
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};
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struct chunk {
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struct rb_node rb_node;
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uint64_t count;
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uint32_t hash[MD5_HASH_WORDS];
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struct flist_head extent_list[0];
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};
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struct item {
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uint64_t offset;
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uint32_t hash[MD5_HASH_WORDS];
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};
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static struct rb_root rb_root;
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static struct bloom *bloom;
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static struct fio_mutex *rb_lock;
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static unsigned int blocksize = 4096;
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static unsigned int num_threads;
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static unsigned int chunk_size = 1048576;
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static unsigned int dump_output;
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static unsigned int odirect;
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static unsigned int collision_check;
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static unsigned int print_progress = 1;
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static unsigned int use_bloom = 1;
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static uint64_t total_size;
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static uint64_t cur_offset;
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static struct fio_mutex *size_lock;
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static struct fio_file file;
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static uint64_t get_size(struct fio_file *f, struct stat *sb)
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{
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uint64_t ret;
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if (S_ISBLK(sb->st_mode)) {
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unsigned long long bytes = 0;
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if (blockdev_size(f, &bytes)) {
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log_err("dedupe: failed getting bdev size\n");
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return 0;
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}
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ret = bytes;
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} else
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ret = sb->st_size;
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return (ret & ~((uint64_t)blocksize - 1));
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}
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static int get_work(uint64_t *offset, uint64_t *size)
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{
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uint64_t this_chunk;
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int ret = 1;
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fio_mutex_down(size_lock);
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if (cur_offset < total_size) {
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*offset = cur_offset;
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this_chunk = min((uint64_t)chunk_size, total_size - cur_offset);
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*size = this_chunk;
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cur_offset += this_chunk;
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ret = 0;
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}
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fio_mutex_up(size_lock);
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return ret;
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}
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static int __read_block(int fd, void *buf, off_t offset, size_t count)
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{
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ssize_t ret;
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ret = pread(fd, buf, count, offset);
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if (ret < 0) {
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perror("pread");
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return 1;
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} else if (!ret)
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return 1;
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else if (ret != count) {
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log_err("dedupe: short read on block\n");
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return 1;
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}
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return 0;
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}
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static int read_block(int fd, void *buf, off_t offset)
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{
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return __read_block(fd, buf, offset, blocksize);
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}
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static void add_item(struct chunk *c, struct item *i)
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{
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/*
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* Save some memory and don't add extent items, if we don't
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* use them.
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*/
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if (dump_output || collision_check) {
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struct extent *e;
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e = malloc(sizeof(*e));
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e->offset = i->offset;
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flist_add_tail(&e->list, &c->extent_list[0]);
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}
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c->count++;
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}
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static int col_check(struct chunk *c, struct item *i)
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{
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struct extent *e;
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char *cbuf, *ibuf;
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int ret = 1;
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cbuf = fio_memalign(blocksize, blocksize);
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ibuf = fio_memalign(blocksize, blocksize);
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e = flist_entry(c->extent_list[0].next, struct extent, list);
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if (read_block(file.fd, cbuf, e->offset))
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goto out;
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if (read_block(file.fd, ibuf, i->offset))
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goto out;
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ret = memcmp(ibuf, cbuf, blocksize);
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out:
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fio_memfree(cbuf, blocksize);
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fio_memfree(ibuf, blocksize);
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return ret;
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}
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static struct chunk *alloc_chunk(void)
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{
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struct chunk *c;
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if (collision_check || dump_output) {
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c = malloc(sizeof(struct chunk) + sizeof(struct flist_head));
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INIT_FLIST_HEAD(&c->extent_list[0]);
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} else
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c = malloc(sizeof(struct chunk));
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return c;
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}
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static void insert_chunk(struct item *i)
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{
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struct rb_node **p, *parent;
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struct chunk *c;
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int diff;
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p = &rb_root.rb_node;
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parent = NULL;
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while (*p) {
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parent = *p;
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c = rb_entry(parent, struct chunk, rb_node);
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diff = memcmp(i->hash, c->hash, sizeof(i->hash));
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if (diff < 0)
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p = &(*p)->rb_left;
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else if (diff > 0)
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p = &(*p)->rb_right;
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else {
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int ret;
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if (!collision_check)
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goto add;
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fio_mutex_up(rb_lock);
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ret = col_check(c, i);
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fio_mutex_down(rb_lock);
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if (!ret)
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goto add;
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p = &(*p)->rb_right;
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}
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}
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c = alloc_chunk();
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RB_CLEAR_NODE(&c->rb_node);
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c->count = 0;
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memcpy(c->hash, i->hash, sizeof(i->hash));
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rb_link_node(&c->rb_node, parent, p);
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rb_insert_color(&c->rb_node, &rb_root);
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add:
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add_item(c, i);
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}
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static void insert_chunks(struct item *items, unsigned int nitems,
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uint64_t *ndupes)
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{
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int i;
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fio_mutex_down(rb_lock);
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for (i = 0; i < nitems; i++) {
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if (bloom) {
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unsigned int s;
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int r;
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s = sizeof(items[i].hash) / sizeof(uint32_t);
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r = bloom_set(bloom, items[i].hash, s);
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*ndupes += r;
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} else
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insert_chunk(&items[i]);
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}
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fio_mutex_up(rb_lock);
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}
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static void crc_buf(void *buf, uint32_t *hash)
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{
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struct fio_md5_ctx ctx = { .hash = hash };
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fio_md5_init(&ctx);
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fio_md5_update(&ctx, buf, blocksize);
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fio_md5_final(&ctx);
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}
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static unsigned int read_blocks(int fd, void *buf, off_t offset, size_t size)
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{
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if (__read_block(fd, buf, offset, size))
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return 0;
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return size / blocksize;
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}
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static int do_work(struct worker_thread *thread, void *buf)
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{
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unsigned int nblocks, i;
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off_t offset;
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int nitems = 0;
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uint64_t ndupes = 0;
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struct item *items;
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offset = thread->cur_offset;
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nblocks = read_blocks(thread->fd, buf, offset, min(thread->size, (uint64_t)chunk_size));
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if (!nblocks)
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return 1;
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items = malloc(sizeof(*items) * nblocks);
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for (i = 0; i < nblocks; i++) {
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void *thisptr = buf + (i * blocksize);
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items[i].offset = offset;
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crc_buf(thisptr, items[i].hash);
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offset += blocksize;
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nitems++;
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}
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insert_chunks(items, nitems, &ndupes);
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free(items);
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thread->items += nitems;
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thread->dupes += ndupes;
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return 0;
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}
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static void *thread_fn(void *data)
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{
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struct worker_thread *thread = data;
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void *buf;
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buf = fio_memalign(blocksize, chunk_size);
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do {
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if (get_work(&thread->cur_offset, &thread->size)) {
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thread->err = 1;
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break;
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}
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if (do_work(thread, buf)) {
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thread->err = 1;
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break;
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}
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} while (1);
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thread->done = 1;
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fio_memfree(buf, chunk_size);
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return NULL;
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}
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static void show_progress(struct worker_thread *threads, unsigned long total)
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{
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unsigned long last_nitems = 0;
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struct timeval last_tv;
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fio_gettime(&last_tv, NULL);
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while (print_progress) {
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unsigned long this_items;
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unsigned long nitems = 0;
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uint64_t tdiff;
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float perc;
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int some_done = 0;
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int i;
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for (i = 0; i < num_threads; i++) {
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nitems += threads[i].items;
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some_done = threads[i].done;
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if (some_done)
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break;
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}
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if (some_done)
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break;
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perc = (float) nitems / (float) total;
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perc *= 100.0;
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this_items = nitems - last_nitems;
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this_items *= blocksize;
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tdiff = mtime_since_now(&last_tv);
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if (tdiff) {
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this_items = (this_items * 1000) / (tdiff * 1024);
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printf("%3.2f%% done (%luKiB/sec)\r", perc, this_items);
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last_nitems = nitems;
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fio_gettime(&last_tv, NULL);
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} else
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printf("%3.2f%% done\r", perc);
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fflush(stdout);
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usleep(250000);
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};
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}
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static int run_dedupe_threads(struct fio_file *f, uint64_t dev_size,
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uint64_t *nextents, uint64_t *nchunks)
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{
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struct worker_thread *threads;
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unsigned long nitems, total_items;
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int i, err = 0;
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total_size = dev_size;
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total_items = dev_size / blocksize;
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cur_offset = 0;
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size_lock = fio_mutex_init(FIO_MUTEX_UNLOCKED);
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threads = malloc(num_threads * sizeof(struct worker_thread));
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for (i = 0; i < num_threads; i++) {
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memset(&threads[i], 0, sizeof(struct worker_thread));
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threads[i].fd = f->fd;
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err = pthread_create(&threads[i].thread, NULL, thread_fn, &threads[i]);
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if (err) {
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log_err("fio: thread startup failed\n");
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break;
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}
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}
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show_progress(threads, total_items);
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nitems = 0;
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*nextents = 0;
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*nchunks = 1;
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for (i = 0; i < num_threads; i++) {
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void *ret;
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pthread_join(threads[i].thread, &ret);
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nitems += threads[i].items;
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*nchunks += threads[i].dupes;
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}
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printf("Threads(%u): %lu items processed\n", num_threads, nitems);
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*nextents = nitems;
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*nchunks = nitems - *nchunks;
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fio_mutex_remove(size_lock);
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free(threads);
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return err;
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}
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static int dedupe_check(const char *filename, uint64_t *nextents,
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uint64_t *nchunks)
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{
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uint64_t dev_size;
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struct stat sb;
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int flags;
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flags = O_RDONLY;
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if (odirect)
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flags |= OS_O_DIRECT;
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memset(&file, 0, sizeof(file));
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file.file_name = strdup(filename);
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file.fd = open(filename, flags);
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if (file.fd == -1) {
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perror("open");
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goto err;
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}
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if (fstat(file.fd, &sb) < 0) {
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perror("fstat");
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goto err;
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}
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dev_size = get_size(&file, &sb);
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if (!dev_size)
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goto err;
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if (use_bloom) {
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uint64_t bloom_entries;
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bloom_entries = 8 * (dev_size / blocksize);
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bloom = bloom_new(bloom_entries);
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}
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printf("Will check <%s>, size <%llu>, using %u threads\n", filename, (unsigned long long) dev_size, num_threads);
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return run_dedupe_threads(&file, dev_size, nextents, nchunks);
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err:
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if (file.fd != -1)
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close(file.fd);
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free(file.file_name);
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return 1;
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}
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static void show_chunk(struct chunk *c)
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{
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struct flist_head *n;
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struct extent *e;
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printf("c hash %8x %8x %8x %8x, count %lu\n", c->hash[0], c->hash[1], c->hash[2], c->hash[3], (unsigned long) c->count);
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flist_for_each(n, &c->extent_list[0]) {
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e = flist_entry(n, struct extent, list);
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printf("\toffset %llu\n", (unsigned long long) e->offset);
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}
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}
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static void show_stat(uint64_t nextents, uint64_t nchunks)
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{
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double perc, ratio;
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printf("Extents=%lu, Unique extents=%lu\n", (unsigned long) nextents, (unsigned long) nchunks);
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if (nchunks) {
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ratio = (double) nextents / (double) nchunks;
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printf("De-dupe ratio: 1:%3.2f\n", ratio - 1.0);
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} else
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printf("De-dupe ratio: 1:infinite\n");
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perc = 1.00 - ((double) nchunks / (double) nextents);
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perc *= 100.0;
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printf("Fio setting: dedupe_percentage=%u\n", (int) (perc + 0.50));
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}
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static void iter_rb_tree(uint64_t *nextents, uint64_t *nchunks)
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{
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struct rb_node *n;
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*nchunks = *nextents = 0;
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n = rb_first(&rb_root);
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if (!n)
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return;
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do {
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struct chunk *c;
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c = rb_entry(n, struct chunk, rb_node);
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(*nchunks)++;
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*nextents += c->count;
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if (dump_output)
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show_chunk(c);
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} while ((n = rb_next(n)) != NULL);
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}
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static int usage(char *argv[])
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{
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log_err("Check for dedupable blocks on a device/file\n\n");
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log_err("%s: [options] <device or file>\n", argv[0]);
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log_err("\t-b\tChunk size to use\n");
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log_err("\t-t\tNumber of threads to use\n");
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log_err("\t-d\tFull extent/chunk debug output\n");
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log_err("\t-o\tUse O_DIRECT\n");
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log_err("\t-c\tFull collision check\n");
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log_err("\t-B\tUse probabilistic bloom filter\n");
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log_err("\t-p\tPrint progress indicator\n");
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return 1;
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}
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int main(int argc, char *argv[])
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{
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uint64_t nextents = 0, nchunks = 0;
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int c, ret;
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arch_init(argv);
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debug_init();
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while ((c = getopt(argc, argv, "b:t:d:o:c:p:B:")) != -1) {
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switch (c) {
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case 'b':
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blocksize = atoi(optarg);
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break;
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case 't':
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num_threads = atoi(optarg);
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break;
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case 'd':
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dump_output = atoi(optarg);
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break;
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case 'o':
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odirect = atoi(optarg);
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break;
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case 'c':
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collision_check = atoi(optarg);
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break;
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case 'p':
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print_progress = atoi(optarg);
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break;
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case 'B':
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use_bloom = atoi(optarg);
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break;
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case '?':
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default:
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return usage(argv);
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}
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}
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if (collision_check || dump_output)
|
|
use_bloom = 0;
|
|
|
|
if (!num_threads)
|
|
num_threads = cpus_online();
|
|
|
|
if (argc == optind)
|
|
return usage(argv);
|
|
|
|
sinit();
|
|
|
|
rb_root = RB_ROOT;
|
|
rb_lock = fio_mutex_init(FIO_MUTEX_UNLOCKED);
|
|
|
|
ret = dedupe_check(argv[optind], &nextents, &nchunks);
|
|
|
|
if (!ret) {
|
|
if (!bloom)
|
|
iter_rb_tree(&nextents, &nchunks);
|
|
|
|
show_stat(nextents, nchunks);
|
|
}
|
|
|
|
fio_mutex_remove(rb_lock);
|
|
if (bloom)
|
|
bloom_free(bloom);
|
|
scleanup();
|
|
return ret;
|
|
}
|